Crucible Data Platform

About Crucible

Crucible -- named for the melting pot used in foundries of yore – is a unified data-management and computational system at the Molecular Foundry. This is an evolving common data platform at the Foundry to enable data acquisition, annotation, access, and analysis, and to facilitate application of AI/ML methods to data collected at the Molecular Foundry by staff and users. 

This data platform enables data sharing, curation, dissemination, and reuse, and in so doing, to unlock vast new opportunities for scientific discovery. 

The interconnected software tools, workflows, and common data schemas to allow users and staff scientists to acquire, annotate, access, analyze, and apply AI/ML methods to these data sets.

Open Source Software

All workflows and infrastructure software are developed in the open and are available on GitHub

FAIR Data

Our goal is to enable FAIR sharing of data at our user facility
https://www.go-fair.org/fair-principles/

Findable

Unique Identifiers. Searchable data catalog.

Accessible

Web-based access to data and analysis workflows worldwide. Data access via Google Drive. Access controls allow user data to stay private until publication. 

Interoperable

Metadata available in standard JSON formats. 

Reusable

Aggregating and reusing of data possible with large collections of historical data

Crucible Team

We have a group of scientists and engineers who develop and maintain the Crucible Data Platform at the Molecular Foundry:

Edward Barnard

Molecular Foundry Data and Analytics Lead Scientist 

Morgan Wall

Scientific Software Engineer and Crucible Lead Developer

Donald Lee

Foundry User Program Database Engineer

Perry Lao

Workstation and Server IT Support